MERCADANTE, Davide
MERCADANTE, Davide
DIPARTIMENTO DI FARMACIA
Plasticity of Nucleoporin Nuclear Transport Receptor Interactions - Molecular Description of a Highly Dynamic, Ultrafast Interaction Mechanism
2016 Aramburu Iker, Valle; Mercadante, D; Milles, Sigrid; Ringkjobing, Malene; Banterle, Niccolo; Koehler, Christine; Tyagi, Swati; Clarke, Jane; Shammas Sarah, L.; Blackledge, Martin; Graeter, Frauke; Lemke Edward, A.
Homogalacturonans Illuminate the Role of Counterion Condensation in Polyelectrolyte Transport
2017 Irani Amir, H.; Owen Jessie, L.; Mercadante, D; Williams Martin, A. K.
The Cell Wall Arabinose-Deficient Arabidopsis thaliana Mutant murus5 Encodes a Defective Allele of REVERSIBLY GLYCOSYLATED POLYPEPTIDE2
2016 Dugard Christopher, K.; Mertz Rachel, A.; Rayon, Catherine; Mercadante, D; Hart, Christopher; Benatti Matheus, R.; Olek Anna, T.; SanMiguel Phillip, J.; Cooper Bruce, R.; Reiter, Wolf-Dieter; McCann Maureen, C.; Carpita Nicholas, C.
A New and Un-Conventional Ultrafast Binding Mechanism of Intrinsically Disordered Proteins to Structured Partners
2015 Mercadante, D; Milles, Sigrid; Lemke Edward, A.; Graeter, Frauke
Protein intrinsic disorder on a dynamic nucleosomal landscape
2021 Bjarnason, Sveinn; Ruidiaz Sarah, F.; Mcivor, Jordan; Mercadante, D; Heidarssona Petur, O.
Bovine beta-Lactoglobulin Is Dimeric Under Imitative Physiological Conditions: Dissociation Equilibrium and Rate Constants over the pH Range of 2.5-7.5
2012 Mercadante, D; Melton Laurence, D.; Norris Gillian, E.; Loo Trevor, S.; Williams Martin, A. K.; Dobson Renwick, C. J.; Jameson Geoffrey, B.
A fast recoiling silk-like elastomer facilitates nanosecond nematocyst discharge
2015 Beckmann, Anna; Xiao, Senbo; Mueller Jochen, P.; Mercadante, D; Nuechter, Timm; Kroeger, Niels; Langhojer, Florian; Petrich, Wolfgang; Holstein Thomas, W.; Benoit, Martin; Graeter, Frauke; Oezbek, Suat
alpha-Synuclein plasma membrane localization correlates with cellular phosphatidylinositol polyphosphate levels
2021 Jacob Reeba, Susan; Eichmann, Cedric; Dema, Alessandro; Mercadante, D; Selenko, Philipp
Sampling Long- versus Short-Range Interactions Defines the Ability of Force Fields To Reproduce the Dynamics of Intrinsically Disordered Proteins
2017 Mercadante, D; Wagner Johannes, A.; Aramburu Iker, V.; Lemke Edward, A.; Graeter, Frauke
Two Differential Binding Mechanisms of FG-Nucleoporins and Nuclear Transport Receptors
2018 Tan Piau, Siong; Aramburu Iker, Valle; Mercadante, D; Tyagi, Swati; Chowdhury, Aritra; Spitz, Daniel; Shammas Sarah, L.; Graeter, Frauke; Lemke Edward, A.
Kirkwood-Buff Approach Rescues Overcollapse of a Disordered Protein in Canonical Protein Force Fields
2015 Mercadante, D; Milles, Sigrid; Fuertes, Gustavo; Svergun Dmitri, I.; Lemke Edward, A.; Graeter, Frauke
New insights into the specificity and processivity of two novel pectinases from Verticillium dahliae
2021 Safran, Josip; Habrylo, Olivier; Cherkaoui, Mehdi; Lecomte, Sylvain; Voxeur, Aline; Pilard, Serge; Bassard, Solene; Pau-Roblot, Corinne; Mercadante, D; Pelloux, Jerome; Senechal, Fabien
Molecular Dynamics Simulations Illuminate the Role of Counterion Condensation in the Electrophoretic Transport of Homogalacturonans
2017 Irani Amir, H.; Owen Jessie, L.; Mercadante, D; Williams Martin, A. K.
Combined Experimental and Computational Approaches Reveal Distinct pH Dependence of Pectin Methylesterase Inhibitors
2017 Hocq, Ludivine; Senechal, Fabien; Lefebvre, Valerie; Lehner, Arnaud; Domon, Jean-Marc; Mollet, Jean-Claude; Dehors, Jeremy; Pageau, Karine; Marcelo, Paulo; Guerineau, Francois; Kolsek, Katra; Mercadante, D; Pelloux, Jerome
CONAN: A Tool to Decode Dynamical Information from Molecular Interaction Maps
2018 Mercadante, D; Graeter, Frauke; Daday, Csaba
Editorial: Advanced Sampling and Modeling in Molecular Simulations for Slow and Large-Scale Biomolecular Dynamics
2021 Chu, Xiakun; Wang, Yong; Tian, Pengfei; Li, Wenfei; Mercadante, D
Plasticity of an Ultrafast Interaction between Nucleoporins and Nuclear Transport Receptors
2015 Milles, Sigrid; Mercadante, D; Aramburu Iker, Valle; Jensen Malene, Ringkjobing; Banterle, Niccolo; Koehler, Christine; Tyagi, Swati; Clarke, Jane; Shammas Sarah, L.; Blackledge, Martin; Graeter, Frauke; Lemke Edward, A.
Rescuing the Over-Collapse of Intrinsically Disordered Proteins using a Force Field Derived by a New Paradigm
2016 Mercadante, D; Milles, Sigrid; Fuertes, Gustavo; Svergun, Dmitri; Lemke Edward, A.; Graeter, Frauke
Simulating polyproline II-helix rich peptides with the latest Kirkwood-Buff force field: a direct comparison with AMBER and CHARMM
In corso di stampa Mcivor, J; Larsen, Ds; Mercadante, D
Structural and mechanistic insights into mechanoactivation of focal adhesion kinase
2019 Bauer Magnus, Sebastian; Baumann, Fabian; Daday, Csaba; Redondo, Pilar; Durner, Ellis; Jobst Markus, Andreas; Milles Lukas, Frederik; Mercadante, D; Pippig Diana, Angela; Gaub Hermann, Eduard; Graeter, Frauke; Lietha, Daniel
| Titolo | Tipologia | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|---|
| Plasticity of Nucleoporin Nuclear Transport Receptor Interactions - Molecular Description of a Highly Dynamic, Ultrafast Interaction Mechanism | 1.1 Articolo in rivista | 2016 | Aramburu Iker, Valle; Mercadante, D; Milles, Sigrid; Ringkjobing, Malene; Banterle, Niccolo; Koehler, Christine; Tyagi, Swati; Clarke, Jane; Shammas Sarah, L.; Blackledge, Martin; Graeter, Frauke; Lemke Edward, A. | |
| Homogalacturonans Illuminate the Role of Counterion Condensation in Polyelectrolyte Transport | 1.1 Articolo in rivista | 2017 | Irani Amir, H.; Owen Jessie, L.; Mercadante, D; Williams Martin, A. K. | |
| The Cell Wall Arabinose-Deficient Arabidopsis thaliana Mutant murus5 Encodes a Defective Allele of REVERSIBLY GLYCOSYLATED POLYPEPTIDE2 | 1.1 Articolo in rivista | 2016 | Dugard Christopher, K.; Mertz Rachel, A.; Rayon, Catherine; Mercadante, D; Hart, Christopher; Benatti Matheus, R.; Olek Anna, T.; SanMiguel Phillip, J.; Cooper Bruce, R.; Reiter, Wolf-Dieter; McCann Maureen, C.; Carpita Nicholas, C. | |
| A New and Un-Conventional Ultrafast Binding Mechanism of Intrinsically Disordered Proteins to Structured Partners | 1.1 Articolo in rivista | 2015 | Mercadante, D; Milles, Sigrid; Lemke Edward, A.; Graeter, Frauke | |
| Protein intrinsic disorder on a dynamic nucleosomal landscape | 1.1 Articolo in rivista | 2021 | Bjarnason, Sveinn; Ruidiaz Sarah, F.; Mcivor, Jordan; Mercadante, D; Heidarssona Petur, O. | |
| Bovine beta-Lactoglobulin Is Dimeric Under Imitative Physiological Conditions: Dissociation Equilibrium and Rate Constants over the pH Range of 2.5-7.5 | 1.1 Articolo in rivista | 2012 | Mercadante, D; Melton Laurence, D.; Norris Gillian, E.; Loo Trevor, S.; Williams Martin, A. K.; Dobson Renwick, C. J.; Jameson Geoffrey, B. | |
| A fast recoiling silk-like elastomer facilitates nanosecond nematocyst discharge | 1.1 Articolo in rivista | 2015 | Beckmann, Anna; Xiao, Senbo; Mueller Jochen, P.; Mercadante, D; Nuechter, Timm; Kroeger, Niels; Langhojer, Florian; Petrich, Wolfgang; Holstein Thomas, W.; Benoit, Martin; Graeter, Frauke; Oezbek, Suat | |
| alpha-Synuclein plasma membrane localization correlates with cellular phosphatidylinositol polyphosphate levels | 1.1 Articolo in rivista | 2021 | Jacob Reeba, Susan; Eichmann, Cedric; Dema, Alessandro; Mercadante, D; Selenko, Philipp | |
| Sampling Long- versus Short-Range Interactions Defines the Ability of Force Fields To Reproduce the Dynamics of Intrinsically Disordered Proteins | 1.1 Articolo in rivista | 2017 | Mercadante, D; Wagner Johannes, A.; Aramburu Iker, V.; Lemke Edward, A.; Graeter, Frauke | |
| Two Differential Binding Mechanisms of FG-Nucleoporins and Nuclear Transport Receptors | 1.1 Articolo in rivista | 2018 | Tan Piau, Siong; Aramburu Iker, Valle; Mercadante, D; Tyagi, Swati; Chowdhury, Aritra; Spitz, Daniel; Shammas Sarah, L.; Graeter, Frauke; Lemke Edward, A. | |
| Kirkwood-Buff Approach Rescues Overcollapse of a Disordered Protein in Canonical Protein Force Fields | 1.1 Articolo in rivista | 2015 | Mercadante, D; Milles, Sigrid; Fuertes, Gustavo; Svergun Dmitri, I.; Lemke Edward, A.; Graeter, Frauke | |
| New insights into the specificity and processivity of two novel pectinases from Verticillium dahliae | 1.1 Articolo in rivista | 2021 | Safran, Josip; Habrylo, Olivier; Cherkaoui, Mehdi; Lecomte, Sylvain; Voxeur, Aline; Pilard, Serge; Bassard, Solene; Pau-Roblot, Corinne; Mercadante, D; Pelloux, Jerome; Senechal, Fabien | |
| Molecular Dynamics Simulations Illuminate the Role of Counterion Condensation in the Electrophoretic Transport of Homogalacturonans | 1.1 Articolo in rivista | 2017 | Irani Amir, H.; Owen Jessie, L.; Mercadante, D; Williams Martin, A. K. | |
| Combined Experimental and Computational Approaches Reveal Distinct pH Dependence of Pectin Methylesterase Inhibitors | 1.1 Articolo in rivista | 2017 | Hocq, Ludivine; Senechal, Fabien; Lefebvre, Valerie; Lehner, Arnaud; Domon, Jean-Marc; Mollet, Jean-Claude; Dehors, Jeremy; Pageau, Karine; Marcelo, Paulo; Guerineau, Francois; Kolsek, Katra; Mercadante, D; Pelloux, Jerome | |
| CONAN: A Tool to Decode Dynamical Information from Molecular Interaction Maps | 1.1 Articolo in rivista | 2018 | Mercadante, D; Graeter, Frauke; Daday, Csaba | |
| Editorial: Advanced Sampling and Modeling in Molecular Simulations for Slow and Large-Scale Biomolecular Dynamics | 1.1 Articolo in rivista | 2021 | Chu, Xiakun; Wang, Yong; Tian, Pengfei; Li, Wenfei; Mercadante, D | |
| Plasticity of an Ultrafast Interaction between Nucleoporins and Nuclear Transport Receptors | 1.1 Articolo in rivista | 2015 | Milles, Sigrid; Mercadante, D; Aramburu Iker, Valle; Jensen Malene, Ringkjobing; Banterle, Niccolo; Koehler, Christine; Tyagi, Swati; Clarke, Jane; Shammas Sarah, L.; Blackledge, Martin; Graeter, Frauke; Lemke Edward, A. | |
| Rescuing the Over-Collapse of Intrinsically Disordered Proteins using a Force Field Derived by a New Paradigm | 1.1 Articolo in rivista | 2016 | Mercadante, D; Milles, Sigrid; Fuertes, Gustavo; Svergun, Dmitri; Lemke Edward, A.; Graeter, Frauke | |
| Simulating polyproline II-helix rich peptides with the latest Kirkwood-Buff force field: a direct comparison with AMBER and CHARMM | 1.1 Articolo in rivista | In corso di stampa | Mcivor, J; Larsen, Ds; Mercadante, D | |
| Structural and mechanistic insights into mechanoactivation of focal adhesion kinase | 1.1 Articolo in rivista | 2019 | Bauer Magnus, Sebastian; Baumann, Fabian; Daday, Csaba; Redondo, Pilar; Durner, Ellis; Jobst Markus, Andreas; Milles Lukas, Frederik; Mercadante, D; Pippig Diana, Angela; Gaub Hermann, Eduard; Graeter, Frauke; Lietha, Daniel |